STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Usp43Ubiquitin specific peptidase 43. (1132 aa)    
Predicted Functional Partners:
Usp10
Ubiquitin specific peptidase 10.
    
0.771
Isg15
ISG15 ubiquitin like modifier.
    
 0.737
Pcna
Proliferating cell nuclear antigen.
   
  0.736
Traf6
TNF receptor associated factor 6.
    
 0.734
Uba52
KxDL motif containing 1.
    
  0.734
Rnf123
Ring finger protein 123.
   
 0.724
Rps27a
Ribosomal protein S27a.
    
 0.722
ENSPEMP00000017817
annotation not available
    
 0.722
Mrps9
Mitochondrial ribosomal protein S9.
   
 
 0.718
Mrpl3
Mitochondrial ribosomal protein L3.
   
 
 0.713
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.