STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adat2Adenosine deaminase, tRNA-specific 2. (191 aa)    
Predicted Functional Partners:
ENSPEMP00000011938
annotation not available
   
 0.998
Tyms
Thymidylate synthetase.
  
 
 0.919
Uprt
Uracil phosphoribosyltransferase homolog.
   
 0.886
Rbks
Ribokinase.
    
 0.876
Tk1
Thymidine kinase 1.
    
 0.863
ENSPEMP00000005395
annotation not available
    
 0.848
Ctu1
Cytosolic thiouridylase subunit 1.
  
 
 0.838
Ndufa4l2
NDUFA4 mitochondrial complex associated like 2.
  
 
 0.831
Cda
Cytidine deaminase.
   
 0.822
Nt5e
5'-nucleotidase ecto.
    
 0.817
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.