STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Usf1Upstream transcription factor 1. (310 aa)    
Predicted Functional Partners:
Usf2
Upstream transcription factor 2.
  
 
0.978
Gtf2i
General transcription factor II I.
    
 
 0.771
Crebbp
CREB binding protein.
    
 0.769
Ep300
E1A binding protein p300.
    
 0.765
Sp1
Sp1 transcription factor.
    
 0.747
Mlst8
MTOR associated protein, LST8 homolog.
    
 
 0.657
Rptor
Regulatory associated protein of MTOR complex 1.
    
 
 0.651
Adamts12
A disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12.
   
  0.650
Esr1
Estrogen receptor 1.
    
 0.645
Arntl
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.607
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.