STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2-M3Histocompatibility 2, M region locus 3. (337 aa)    
Predicted Functional Partners:
B2m
Beta-2 microglobulin.
   
 0.948
Rpa2
Replication protein A2.
   
 0.941
Trac
T cell receptor alpha constant.
    
  0.888
ENSPEMP00000028192
annotation not available
    
 0.825
ENSPEMP00000030939
annotation not available
    
 0.824
H2-DMa
Class II histocompatibility antigen, M alpha chain.
   
 
 0.789
ENSPEMP00000009385
annotation not available
    
  0.773
ENSPEMP00000016113
annotation not available
   
 
 0.772
H2-Ea-ps
H-2 class II histocompatibility antigen, E-K alpha chain.
   
 
  0.767
Tapbp
TAP binding protein.
   
 
 0.760
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.