STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1qtnf2C1q and TNF related 2. (318 aa)    
Predicted Functional Partners:
Col4a4
Collagen, type IV, alpha 4.
  
  
 
0.850
Col4a6
Collagen type IV alpha 6 chain.
  
 
0.823
Col4a2
Collagen type IV alpha 2 chain.
    
0.809
ENSPEMP00000002009
annotation not available
    
 0.768
Tep1
Telomerase associated protein 1.
    
 0.768
Ncald
Neurocalcin delta.
    
   0.737
Col2a1
Collagen type II alpha 1 chain.
  
0.731
C1qc
Complement component 1, q subcomponent, C chain.
  
 
 
0.723
Serpinh1
Serpin family H member 1.
    
 0.672
Col1a1
Collagen type I alpha 1 chain.
  
0.668
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.