STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PlpbpPyridoxal phosphate binding protein. (275 aa)    
Predicted Functional Partners:
Lacc1
Laccase domain containing 1.
  
  
 0.947
Aadat
Aminoadipate aminotransferase.
  
 
 0.863
ENSPEMP00000027410
annotation not available
  
  
 0.859
ENSPEMP00000035581
annotation not available
  
  
 0.859
Mrpl36
Mitochondrial ribosomal protein L36.
  
    0.823
Pipox
Pipecolic acid oxidase.
    
 0.818
Acod1
Aconitate decarboxylase 1.
    
 0.797
Dao
D-amino acid oxidase.
    
 0.782
Ddo
D-aspartate oxidase.
    
 0.782
Mrpl24
Mitochondrial ribosomal protein L24.
  
    0.730
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.