STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Syt9Synaptotagmin 9. (491 aa)    
Predicted Functional Partners:
Syt2
Synaptotagmin 2.
  
 
0.778
Itsn2
Intersectin 2.
     
 0.759
ENSPEMP00000032387
annotation not available
     
 0.759
Syt1
Synaptotagmin 1.
  
 
0.748
Slc18a3
Solute carrier family 18 member A3.
     
 0.709
Vamp8
Vesicle associated membrane protein 8.
     
 0.708
Ston2
Stonin 2.
     
 0.700
Vamp2
Vesicle-associated membrane protein 2.
     
 0.696
Syt8
Synaptotagmin VIII.
    
0.690
Vamp3
Vesicle associated membrane protein 3.
     
 0.690
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.