STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AspdhAspartate dehydrogenase domain containing. (287 aa)    
Predicted Functional Partners:
Qprt
Quinolinate phosphoribosyltransferase.
  
 
  0.875
Got2
Glutamatic-oxaloacetic transaminase 2, mitochondrial.
     
 0.869
Got1
Glutamic-oxaloacetic transaminase 1.
     
 0.869
Got1l1
Glutamic-oxaloacetic transaminase 1 like 1.
     
 0.869
Naprt
Nicotinate phosphoribosyltransferase.
    
 0.847
Mroh6
Maestro heat like repeat family member 6.
    
 0.847
Ass1
Argininosuccinate synthase 1.
   
 
  0.840
Cad
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
    
  0.836
Cps1
Carbamoyl-phosphate synthase 1.
    
  0.803
Kdm1b
Lysine (K)-specific demethylase 1B.
    
  0.714
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.