STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc33Coiled-coil domain containing 33. (934 aa)    
Predicted Functional Partners:
ENSPEMP00000002009
annotation not available
    
 0.768
Tep1
Telomerase associated protein 1.
    
 0.768
C1qc
Complement component 1, q subcomponent, C chain.
    
  0.705
Mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.631
Taf12
TATA-box binding protein associated factor 12.
    
 0.597
Trrap
Transformation/transcription domain associated protein.
    
  0.594
Taf9b
TATA-box binding protein associated factor 9B.
    
  0.593
Tnfaip6
TNF alpha induced protein 6.
    
 0.588
Acd
Adrenocortical dysplasia.
    
  0.557
Tada1
Transcriptional adaptor 1.
    
  0.551
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.