STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ikzf3IKAROS family zinc finger 3. (508 aa)    
Predicted Functional Partners:
Crbn
Cereblon.
    
 
 0.944
Ikzf1
IKAROS family zinc finger 1.
   
 
0.920
Ikzf4
IKAROS family zinc finger 4.
   
  
0.890
Ddb1
Damage specific DNA binding protein 1.
    
 0.784
Ikzf2
IKAROS family zinc finger 2.
   
  
0.741
Ikzf5
IKAROS family zinc finger 5.
    
 
0.733
ENSPEMP00000036160
annotation not available
    
 
0.733
Rad21
RAD21 cohesin complex component.
    
 0.670
Rad21l
RAD21-like (S. pombe).
    
 0.670
Rbx1
Ring-box 1.
     
 0.658
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.