STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DaxxFas death domain-associated protein. (710 aa)    
Predicted Functional Partners:
Atrx
ATRX, chromatin remodeler.
    
 0.997
Fas
Fas (TNF receptor superfamily member 6).
    
 0.992
Map3k5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.992
Trp53
Transformation related protein 53.
   
 0.988
ENSPEMP00000031900
annotation not available
   
 0.988
Pml
Promyelocytic leukemia.
   
 0.987
Usp7
Ubiquitin specific peptidase 7.
    
 0.984
Sumo1
Small ubiquitin like modifier 1.
    
 0.973
ENSPEMP00000033337
annotation not available
    
 0.973
ENSPEMP00000007956
annotation not available
    
 0.970
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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