STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc6a4Solute carrier family 6 member 4. (631 aa)    
Predicted Functional Partners:
Drd4
Dopamine receptor D4.
    
 0.872
Drd2
Dopamine receptor D2.
    
 0.868
Ctnnb1
Catenin (cadherin associated protein), beta 1.
     
 0.841
Slc6a1
Solute carrier family 6 member 1.
  
  
0.840
Slc1a1
annotation not available
    
 0.839
Slc6a2
Solute carrier family 6 member 2.
  
  
0.837
Slc1a3
Solute carrier family 1 (glial high affinity glutamate transporter), member 3.
    
 0.837
Slc1a2
Solute carrier family 1 (glial high affinity glutamate transporter), member 2.
    
 0.833
Drd3
Dopamine receptor D3.
    
 0.820
Slc6a7
Solute carrier family 6 member 7.
  
  
0.820
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.