STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ankrd13bAnkyrin repeat domain 13b. (627 aa)    
Predicted Functional Partners:
Uba52
KxDL motif containing 1.
    
   0.684
LOC102923670
Ubiquitin.
    
   0.684
ENSPEMP00000022131
annotation not available
    
   0.684
Myo9a
Myosin IXa.
     
 0.645
Myo9b
Myosin IXB.
     
 0.645
Tmem25
Transmembrane protein 25.
      
 0.569
Tmem91
Transmembrane protein 91.
      
 0.564
Dnajc30
DnaJ heat shock protein family (Hsp40) member C30.
      
 0.556
Syndig1l
Synapse differentiation inducing 1 like.
      
 0.555
Eml1
EMAP like 1.
      
 0.499
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.