STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cop1COP1, E3 ubiquitin ligase. (721 aa)    
Predicted Functional Partners:
Ddb1
Damage specific DNA binding protein 1.
    
 0.998
Cul4a
Cullin 4A.
    
 0.997
Trib1
Tribbles pseudokinase 1.
    
 
 0.994
Trib3
Tribbles pseudokinase 3.
    
 
 0.993
Etv5
ETS variant transcription factor 5.
    
 
 0.992
Stk40
Serine/threonine kinase 40.
    
 
 0.992
Jun
Jun proto-oncogene, AP-1 transcription factor subunit.
    
 
 0.992
Etv1
Ets variant 1.
    
 
 0.992
Trib2
Tribbles pseudokinase 2.
    
 
 0.990
ENSPEMP00000031358
annotation not available
    
 0.988
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.