STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sec61a1SEC61 translocon alpha 1 subunit. (476 aa)    
Predicted Functional Partners:
Sec63
SEC63-like (S. cerevisiae).
   
 0.999
Sec61b
SEC61 translocon beta subunit.
   
 0.994
Rpn1
Ribophorin I.
   
 0.993
Rpl26
Ribosomal protein L26.
  
 
 0.992
Mrpl24
Mitochondrial ribosomal protein L24.
  
 
 0.991
Rpl11
Ribosomal protein L11.
  
 
 0.991
ENSPEMP00000032958
annotation not available
  
 
 0.991
ENSPEMP00000000243
annotation not available
 
 
 0.990
ENSPEMP00000008126
annotation not available
  
 0.990
ENSPEMP00000015502
annotation not available
  
 
 0.990
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.