STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Angptl6Angiopoietin-like 6. (459 aa)    
Predicted Functional Partners:
Angptl8
Angiopoietin like 8.
    
 0.794
Kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.762
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
     
 0.728
Met
MET proto-oncogene, receptor tyrosine kinase.
     
 0.728
Tex30
Testis expressed 30.
    
 0.685
Kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.685
Mcrs1
Microspherule protein 1.
    
 0.677
Tie1
Tyrosine kinase with immunoglobulin-like and EGF-like domains 1.
    
 0.640
Fam20b
FAM20B glycosaminoglycan xylosylkinase.
  
  
  0.617
Phf13
PHD finger protein 13.
    
 0.614
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.