Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acan | Bgn | ENSPEMP00000020873 | ENSPEMP00000018622 | Aggrecan. | Biglycan. | 0.837 |
Acan | Dcn | ENSPEMP00000020873 | ENSPEMP00000021763 | Aggrecan. | Decorin. | 0.721 |
Acan | Fmod | ENSPEMP00000020873 | ENSPEMP00000015346 | Aggrecan. | Fibromodulin. | 0.841 |
Acan | Kera | ENSPEMP00000020873 | ENSPEMP00000013106 | Aggrecan. | Keratocan. | 0.743 |
Acan | Tgfb3 | ENSPEMP00000020873 | ENSPEMP00000027826 | Aggrecan. | Transforming growth factor, beta 3. | 0.403 |
Acan | Thbs4 | ENSPEMP00000020873 | ENSPEMP00000024462 | Aggrecan. | Thrombospondin 4. | 0.818 |
Acan | Tnmd | ENSPEMP00000020873 | ENSPEMP00000010330 | Aggrecan. | Tenomodulin. | 0.416 |
Bgn | Acan | ENSPEMP00000018622 | ENSPEMP00000020873 | Biglycan. | Aggrecan. | 0.837 |
Bgn | Dcn | ENSPEMP00000018622 | ENSPEMP00000021763 | Biglycan. | Decorin. | 0.828 |
Bgn | Fmod | ENSPEMP00000018622 | ENSPEMP00000015346 | Biglycan. | Fibromodulin. | 0.898 |
Bgn | Kera | ENSPEMP00000018622 | ENSPEMP00000013106 | Biglycan. | Keratocan. | 0.706 |
Bgn | Tgfb3 | ENSPEMP00000018622 | ENSPEMP00000027826 | Biglycan. | Transforming growth factor, beta 3. | 0.646 |
Bgn | Thbs4 | ENSPEMP00000018622 | ENSPEMP00000024462 | Biglycan. | Thrombospondin 4. | 0.484 |
Bgn | Tnmd | ENSPEMP00000018622 | ENSPEMP00000010330 | Biglycan. | Tenomodulin. | 0.420 |
Dcn | Acan | ENSPEMP00000021763 | ENSPEMP00000020873 | Decorin. | Aggrecan. | 0.721 |
Dcn | Bgn | ENSPEMP00000021763 | ENSPEMP00000018622 | Decorin. | Biglycan. | 0.828 |
Dcn | Fmod | ENSPEMP00000021763 | ENSPEMP00000015346 | Decorin. | Fibromodulin. | 0.730 |
Dcn | Kera | ENSPEMP00000021763 | ENSPEMP00000013106 | Decorin. | Keratocan. | 0.443 |
Dcn | Tgfb3 | ENSPEMP00000021763 | ENSPEMP00000027826 | Decorin. | Transforming growth factor, beta 3. | 0.897 |
Dcn | Thbs4 | ENSPEMP00000021763 | ENSPEMP00000024462 | Decorin. | Thrombospondin 4. | 0.540 |
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