STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trip12Thyroid hormone receptor interactor 12. (2025 aa)    
Predicted Functional Partners:
Ubr2
Ubiquitin protein ligase E3 component n-recognin 2.
   
 0.996
Ubr1
Ubiquitin protein ligase E3 component n-recognin 1.
   
 0.996
ENSPEMP00000000766
annotation not available
    
 0.992
Uba1
Ubiquitin like modifier activating enzyme 1.
   
 0.992
Uba7
Ubiquitin-like modifier activating enzyme 7.
   
 0.992
Uba3
Ubiquitin like modifier activating enzyme 3.
    
 0.992
Uba6
Ubiquitin like modifier activating enzyme 6.
   
 0.992
Ltn1
Listerin E3 ubiquitin protein ligase 1.
   
 
 0.990
Usp34
Ubiquitin specific peptidase 34.
   
 
 0.986
Uba5
Ubiquitin-like modifier activating enzyme 5.
    
 0.986
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.