STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc174Coiled-coil domain containing 174. (467 aa)    
Predicted Functional Partners:
Nrde2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.847
Dld
Dihydrolipoamide dehydrogenase.
   
    0.846
Zfp830
Zinc finger protein 830.
   
    0.831
Hspa5
Heat shock protein 5.
   
  
 0.829
Eif4a3
Eukaryotic translation initiation factor 4A3.
    
 
 0.789
Trappc5
Trafficking protein particle complex 5.
   
 
  0.789
Anln
Anillin actin binding protein.
   
 
 0.755
Rac3
Rac family small GTPase 3.
   
 0.750
Rhoj
Ras homolog family member J.
   
 0.750
Rhoh
Ras homolog family member H.
   
 0.750
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.