STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ly6g6cLymphocyte antigen 6 complex, locus G6C. (152 aa)    
Predicted Functional Partners:
Lgals7
Galectin 7.
   
    0.821
Ly6g6e
Lymphocyte antigen 6 complex, locus G6E.
      
 0.507
Btbd18
BTB domain containing 18.
  
     0.482
Itfg1
Integrin alpha FG-GAP repeat containing 1.
      
 0.465
Ly6g6d
Lymphocyte antigen 6 family member G6D.
     
 0.457
Zfp646
Zinc finger protein 646.
  
     0.434
Cmtm5
CKLF like MARVEL transmembrane domain containing 5.
  
     0.433
Dzip3
DAZ interacting zinc finger protein 3.
  
     0.433
Ccr4
Chemokine (C-C motif) receptor 4.
    
 
 0.428
Slc39a2
Solute carrier family 39 (zinc transporter), member 2.
   
 
 0.416
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.