STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spsb1splA/ryanodine receptor domain and SOCS box containing 1. (273 aa)    
Predicted Functional Partners:
Cul5
Cullin 5.
    
 0.907
Mycbp2
MYC binding protein 2.
    
 
 0.906
Eloc
Elongin C.
    
 0.896
ENSPEMP00000011181
annotation not available
    
 0.896
ENSPEMP00000011183
annotation not available
    
 0.896
ENSPEMP00000012217
annotation not available
    
 0.896
ENSPEMP00000035631
annotation not available
    
 0.896
ENSPEMP00000020728
annotation not available
    
 0.842
Skp1a
S-phase kinase associated protein 1.
    
 0.842
Rnf7
Ring finger protein 7.
    
 0.808
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.