STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MecomMDS1 and EVI1 complex locus. (1051 aa)    
Predicted Functional Partners:
Ctbp1
C-terminal binding protein 1.
    
 0.971
Ctbp2
C-terminal binding protein 2.
    
 0.945
ENSPEMP00000013721
annotation not available
 
 
 
  0.936
Rbbp7
RB binding protein 7, chromatin remodeling factor.
    
  0.914
Rbbp4
RB binding protein 4, chromatin remodeling factor.
    
  0.914
ENSPEMP00000006096
annotation not available
    
  0.914
ENSPEMP00000033311
annotation not available
    
  0.914
ENSPEMP00000034737
annotation not available
    
  0.914
Hdac2
Histone deacetylase 2.
    
 0.894
ENSPEMP00000027231
annotation not available
    
 0.885
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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