STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gjc3Gap junction protein gamma 3. (258 aa)    
Predicted Functional Partners:
Gja4
Gap junction protein alpha 4.
    
0.925
Gja1
Gap junction protein alpha 1.
    
0.925
Gjc2
Gap junction protein gamma 2.
  
 
0.923
Gjb1
Gap junction protein beta 1.
     
0.920
Gje1
Gap junction epsilon-1 protein.
     
0.917
Gja5
Gap junction protein, alpha 5.
     
0.917
Gjb2
Gap junction protein beta 2.
  
  
0.911
Gjb6
Gap junction protein beta 6.
     
0.909
Gjc1
Gap junction protein gamma 1.
  
  
 
0.908
Gja10
Gap junction protein alpha 10.
     
0.905
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.