STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Isl2ISL LIM homeobox 2. (359 aa)    
Predicted Functional Partners:
Lhx3
LIM homeobox 3.
    
0.972
Lhx4
LIM homeobox 4.
    
0.970
Ldb1
LIM domain binding 1.
    
 0.953
Ldb2
LIM domain binding 2.
    
 0.950
Ssbp2
Single-stranded DNA binding protein 2.
    
 
 0.897
LOC102919018
Isopentenyl-diphosphate delta-isomerase 2-like.
    
   0.801
Ssbp4
Single stranded DNA binding protein 4.
    
 
 0.758
Ssbp3
Single-stranded DNA binding protein 3.
    
 
 0.758
Lmo4
LIM domain only 4.
    
  
0.696
Ptf1a
Pancreas associated transcription factor 1a.
   
 0.688
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.