STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102917814Dynein light chain 1, cytoplasmic-like. (89 aa)    
Predicted Functional Partners:
Wdr60
WD repeat domain 60.
    
 0.987
Wdr34
WD repeat domain 34.
    
 0.984
Dync1i1
Dynein cytoplasmic 1 intermediate chain 1.
    
 0.976
Dync1i2
Dynein cytoplasmic 1 intermediate chain 2.
    
 0.976
Dync2h1
Dynein cytoplasmic 2 heavy chain 1.
    
 0.972
Dynlt3
Dynein light chain Tctex-type 3.
    
 0.967
Dync2li1
Dynein cytoplasmic 2 light intermediate chain 1.
    
 0.966
Dynll2
Dynein light chain LC8-type 2.
  
 
0.963
Dynlrb2
Dynein light chain roadblock-type 2.
   
 0.959
Dynlt1
Dynein light chain Tctex-type 1.
   
 0.956
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.