STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zfp354cZinc finger protein 354C. (560 aa)    
Predicted Functional Partners:
Trim28
Tripartite motif containing 28.
    
 0.876
Trim33
Tripartite motif-containing 33.
    
 0.766
Trim24
Tripartite motif-containing 24.
    
 0.724
Tle3
TLE family member 3, transcriptional corepressor.
    
 
 0.631
Pitx1
Paired-like homeodomain transcription factor 1.
    
 
 0.606
Metrn
Meteorin, glial cell differentiation regulator.
    
 
 0.596
Lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.574
Mrps11
Mitochondrial ribosomal protein S11.
    
  0.564
Scai
Suppressor of cancer cell invasion.
      
 0.562
Mrps28
Mitochondrial ribosomal protein S28.
    
  0.554
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.