STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ascc2Activating signal cointegrator 1 complex subunit 2. (749 aa)    
Predicted Functional Partners:
Ascc3
Activating signal cointegrator 1 complex subunit 3.
    
 0.998
Trip4
Thyroid hormone receptor interactor 4.
    
 0.996
Ascc1
Activating signal cointegrator 1 complex subunit 1.
    
 0.995
Hfm1
HFM1, ATP-dependent DNA helicase homolog.
    
 0.992
ENSPEMP00000023753
annotation not available
    
 0.988
Akap7
A-kinase anchoring protein 7.
    
 0.975
Rad23b
RAD23 homolog B, nucleotide excision repair protein.
   
  0.923
Phf21a
PHD finger protein 21A.
    
  0.916
Lig4
Ligase IV, DNA, ATP-dependent.
   
 
  0.904
Ercc4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 
  0.904
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.