STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cabp5Calcium-binding protein 5. (178 aa)    
Predicted Functional Partners:
Cask
Calcium/calmodulin dependent serine protein kinase.
    
 0.915
Myo3a
Myosin IIIA.
   
 0.877
Myo3b
Myosin IIIB.
   
 0.877
Guk1
Guanylate kinase 1.
   
 0.839
Ranbp2
RAN binding protein 2.
   
 0.820
Xpc
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.788
Camk2b
Calcium/calmodulin-dependent protein kinase II, beta.
    
 0.771
Camk2d
Calcium/calmodulin dependent protein kinase II delta.
    
 0.771
Camk2a
Calcium/calmodulin dependent protein kinase II alpha.
    
 0.771
Tnni1
Troponin I1, slow skeletal type.
   
 0.763
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.