STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tuba1cTubulin alpha-1C chain. (449 aa)    
Predicted Functional Partners:
Tubb3
Tubulin beta 3 class III.
  
0.955
Tubb4a
Tubulin beta 4A class IVa.
  
0.955
Tubb5
Tubulin beta class I.
  
0.952
Tubb6
Tubulin beta 6 class V.
  
0.952
Tubb1
Tubulin, beta 1 class VI.
  
0.951
Tubb2b
Tubulin beta-2B chain.
  
0.915
Tubb4b
Tubulin beta 4B class IVb.
  
0.911
ENSPEMP00000031684
annotation not available
 
0.910
Dclk1
Doublecortin like kinase 1.
    
 
 0.906
Cenpi
Centromere protein I.
   
 0.904
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.