STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E2f8E2F transcription factor 8. (861 aa)    
Predicted Functional Partners:
Tfdp1
Transcription factor Dp-1.
    
 0.905
Tfdp2
Transcription factor Dp-2.
    
 0.905
Rbl1
RB transcriptional corepressor like 1.
   
 0.903
Rbl2
RB transcriptional corepressor like 2.
   
 0.901
ENSPEMP00000016954
annotation not available
   
  
 0.899
Rb1
RB transcriptional corepressor 1.
    
 0.899
Ttk
Ttk protein kinase.
   
  
 0.898
Ccna2
Cyclin A2.
   
 
 0.889
Nek2
NIMA (never in mitosis gene a)-related expressed kinase 2.
   
  
 0.881
Kif11
Kinesin family member 11.
   
  
 0.881
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.