STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Armc7Armadillo repeat containing 7. (198 aa)    
Predicted Functional Partners:
Rbm48
RNA binding motif protein 48.
  
 
 
 0.979
Scnm1
Sodium channel modifier 1.
    
 
 0.919
Gpkow
G-patch domain and KOW motifs.
   
   0.918
Ppil2
Peptidylprolyl isomerase like 2.
    
 
 0.913
Crnkl1
Crooked neck-like protein 1.
    
   0.912
Rnf113a1
Ring finger protein 113A.
    
   0.912
Eftud2
Elongation factor Tu GTP binding domain containing 2.
    
   0.912
ENSPEMP00000005468
annotation not available
    
   0.912
Sf3b3
Splicing factor 3b subunit 3.
    
   0.912
Sf3b1
Splicing factor 3b, subunit 1.
    
   0.912
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.