STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TT-box transcription factor T. (434 aa)    
Predicted Functional Partners:
Bmp4
Bone morphogenetic protein 4.
     
 0.840
Gata2
GATA binding protein 2.
   
 0.792
Gata3
GATA binding protein 3.
   
 0.792
Rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.763
Noto
Notochord homeobox.
    
 0.761
Ruvbl2
RuvB like AAA ATPase 2.
    
  0.751
Ccnc
Cyclin C.
   
  0.739
Med7
Mediator complex subunit 7.
    
  0.734
Foxh1
Forkhead box H1.
   
 
 0.732
Med17
Mediator complex subunit 17.
     
 0.728
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.