STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vat1lVesicle amine transport 1 like. (417 aa)    
Predicted Functional Partners:
ENSPEMP00000037160
annotation not available
  
 0.892
Suox
Sulfite oxidase.
    
 0.889
Hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.877
Katnal2
Katanin p60 subunit A-like 2.
   
 0.777
Adhfe1
Alcohol dehydrogenase iron containing 1.
    
 0.770
Atp5d
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit.
    
 0.766
Dera
Deoxyribose-phosphate aldolase.
    
 0.751
Wwox
WW domain-containing oxidoreductase.
  
 0.748
Kmo
Kynurenine 3-monooxygenase.
  
 
 0.726
Atp5c1
ATP synthase F1 subunit gamma.
     
 0.721
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.