STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AslArgininosuccinate lyase. (464 aa)    
Predicted Functional Partners:
Ass1
Argininosuccinate synthase 1.
 
 
 0.998
Nags
N-acetylglutamate synthase.
  
 
 0.996
Oat
Ornithine aminotransferase.
  
 
 0.993
Otc
Ornithine carbamoyltransferase.
  
  
 0.934
Cps1
Carbamoyl-phosphate synthase 1.
  
 
 0.931
Cad
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
  
 
 0.930
Tmem116
Transmembrane protein 116.
  
 
 0.929
Gpr143
G protein-coupled receptor 143.
  
 
 0.929
Agmat
Agmatine ureohydrolase (agmatinase).
    
 0.924
Sdhb
Succinate dehydrogenase complex iron sulfur subunit B.
    
 0.923
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.