STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TgfbiTransforming growth factor beta induced. (683 aa)    
Predicted Functional Partners:
Ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
    
 
 0.940
Mre11a
MRE11 homolog, double strand break repair nuclease.
    
 0.838
Ndufs8
NADH:ubiquinone oxidoreductase core subunit S8.
    
 
 0.813
Gbe1
Glucan (1,4-alpha-), branching enzyme 1.
    
 0.802
Gch1
GTP cyclohydrolase 1.
     
 0.777
Ndufs3
NADH:ubiquinone oxidoreductase core subunit S3.
    
   0.745
Dnajc3
DnaJ heat shock protein family (Hsp40) member C3.
     
 0.697
Akp3
Intestinal-type alkaline phosphatase.
     
 0.620
Alpl
Alkaline phosphatase, biomineralization associated.
     
 0.620
LOC102923842
Alkaline phosphatase, placental-like.
     
 0.620
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.