STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnldc1PARN like, ribonuclease domain containing 1. (532 aa)    
Predicted Functional Partners:
Parn
poly(A)-specific ribonuclease (deadenylation nuclease).
  
  
0.851
Dcp2
Decapping mRNA 2.
     
 0.766
Exosc5
Exosome component 5.
     
 0.718
ENSPEMP00000016291
annotation not available
     
 0.703
Exosc2
Exosome component 2.
     
 0.702
Exosc3
Exosome component 3.
     
 0.699
Exosc4
Exosome component 4.
     
 0.697
Exosc7
Exosome component 7.
     
 0.695
Exosc9
Exosome component 9.
   
 
 0.684
Exosc8
Exosome component 8.
     
 0.672
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.