STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ankib1Ankyrin repeat and IBR domain containing 1. (1085 aa)    
Predicted Functional Partners:
Ube2l3
Ubiquitin conjugating enzyme E2 L3.
    
 0.824
Ube2l6
Ubiquitin conjugating enzyme E2 L6.
    
 0.824
Rnf216
Ring finger protein 216.
    
 0.821
Rps27a
Ribosomal protein S27a.
    
 0.807
ENSPEMP00000017817
annotation not available
    
 0.807
Zfand4
Zinc finger AN1-type containing 4.
   
 0.784
Klhdc3
Kelch domain containing 3.
    
 0.783
Birc6
Baculoviral IAP repeat-containing 6.
    
 0.782
Tnf
Tumor necrosis factor.
    
 0.779
Uba52
KxDL motif containing 1.
    
  0.773
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.