STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Laptm5Lysosomal protein transmembrane 5. (262 aa)    
Predicted Functional Partners:
Cd53
CD53 molecule.
   
  
 0.891
Nckap1l
NCK associated protein 1 like.
   
  
 0.873
Coro1a
Coronin 1A.
   
  
 0.866
Itgb2
Integrin beta 2.
   
 
 0.860
Itgb2l
Integrin beta 2-like.
   
 
 0.858
Laptm4b
Lysosomal protein transmembrane 4 beta.
     
 0.857
Laptm4a
Lysosomal protein transmembrane 4 alpha.
     
0.847
Hcls1
Hematopoietic cell-specific Lyn substrate 1.
   
    0.836
Lcp1
Lymphocyte cytosolic protein 1.
   
    0.834
Matn3
Matrilin 3.
 
   
 0.749
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.