Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccdc36 | Gm960 | ENSPEMP00000013345 | ENSPEMP00000018031 | Coiled-coil domain containing 36. | Predicted gene 960. | 0.495 |
Ccdc36 | Rec114 | ENSPEMP00000013345 | ENSPEMP00000022783 | Coiled-coil domain containing 36. | REC114 meiotic recombination protein. | 0.567 |
Ccdc36 | Spo11 | ENSPEMP00000013345 | ENSPEMP00000022086 | Coiled-coil domain containing 36. | SPO11 initiator of meiotic double stranded breaks. | 0.456 |
Gm960 | Ccdc36 | ENSPEMP00000018031 | ENSPEMP00000013345 | Predicted gene 960. | Coiled-coil domain containing 36. | 0.495 |
Gm960 | Rec114 | ENSPEMP00000018031 | ENSPEMP00000022783 | Predicted gene 960. | REC114 meiotic recombination protein. | 0.465 |
Gm960 | Spo11 | ENSPEMP00000018031 | ENSPEMP00000022086 | Predicted gene 960. | SPO11 initiator of meiotic double stranded breaks. | 0.665 |
Rec114 | Ccdc36 | ENSPEMP00000022783 | ENSPEMP00000013345 | REC114 meiotic recombination protein. | Coiled-coil domain containing 36. | 0.567 |
Rec114 | Gm960 | ENSPEMP00000022783 | ENSPEMP00000018031 | REC114 meiotic recombination protein. | Predicted gene 960. | 0.465 |
Rec114 | Spo11 | ENSPEMP00000022783 | ENSPEMP00000022086 | REC114 meiotic recombination protein. | SPO11 initiator of meiotic double stranded breaks. | 0.573 |
Spo11 | Ccdc36 | ENSPEMP00000022086 | ENSPEMP00000013345 | SPO11 initiator of meiotic double stranded breaks. | Coiled-coil domain containing 36. | 0.456 |
Spo11 | Gm960 | ENSPEMP00000022086 | ENSPEMP00000018031 | SPO11 initiator of meiotic double stranded breaks. | Predicted gene 960. | 0.665 |
Spo11 | Rec114 | ENSPEMP00000022086 | ENSPEMP00000022783 | SPO11 initiator of meiotic double stranded breaks. | REC114 meiotic recombination protein. | 0.573 |