STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rfwd3Ring finger and WD repeat domain 3. (773 aa)    
Predicted Functional Partners:
Rpa3
Replication protein A3.
    
 
 0.987
Rpa1
Replication protein A1.
   
 0.984
Primpol
Primase and polymerase (DNA-directed).
    
 
 0.979
Rpa2
Replication protein A2.
    
 0.920
ENSPEMP00000032016
annotation not available
   
 0.902
ENSPEMP00000032777
annotation not available
   
 0.902
Wrn
Werner syndrome RecQ like helicase.
    
 
 0.896
B2m
Beta-2 microglobulin.
    
 0.889
Stn1
STN1, CST complex subunit.
    
 0.766
Trpm7
Transient receptor potential cation channel, subfamily M, member 7.
     
 0.755
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.