STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CebpzCCAAT enhancer binding protein zeta. (1052 aa)    
Predicted Functional Partners:
Noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
 0.999
Ddx18
DEAD-box helicase 18.
   
 0.999
Pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.999
Rsl1d1
Ribosomal L1 domain containing 1.
   
 0.998
Nop2
NOP2 nucleolar protein.
   
 0.998
Nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
 0.998
Nsun6
NOP2/Sun RNA methyltransferase 6.
   
 0.998
Pdcd11
Programmed cell death 11.
   
 0.997
Ebna1bp2
EBNA1 binding protein 2.
   
 0.997
Brix1
Biogenesis of ribosomes BRX1.
   
 0.997
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.