STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc5a1Solute carrier family 5 member 1. (665 aa)    
Predicted Functional Partners:
Gm5134
Predicted gene 5134.
  
  
 
0.826
Prodh
Proline dehydrogenase 1, mitochondrial.
  
  
 0.694
Prodh2
Proline dehydrogenase 2.
  
  
 0.694
ENSPEMP00000017696
annotation not available
    
   0.684
Pdzk1ip1
PDZK1 interacting protein 1.
    
   0.684
Aldh7a1
Aldehyde dehydrogenase family 7, member A1.
  
 
 0.619
Aldh18a1
Aldehyde dehydrogenase 18 family member A1.
     
 0.612
Slc2a2
Solute carrier family 2 member 2.
   
  
 0.587
Egfr
Epidermal growth factor receptor.
    
 
 0.557
Aprt
Adenine phosphoribosyltransferase.
   
  
 0.535
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.