STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ryr1Ryanodine receptor 1, skeletal muscle. (5054 aa)    
Predicted Functional Partners:
Fkbp1a
FKBP prolyl isomerase 1A.
    
 0.988
Fkbp1b
FKBP prolyl isomerase 1B.
    
 0.988
Ryr2
Ryanodine receptor 2, cardiac.
  
 
0.984
Trdn
Triadin.
   
 0.983
Calml3
Calmodulin like 3.
    
 0.982
Ryr3
Ryanodine receptor 3.
  
 
0.977
Cacna1s
Calcium voltage-gated channel subunit alpha1 S.
   
 0.972
Calml4
Calmodulin like 4.
    
 0.968
Casq1
Calsequestrin 1.
   
 0.948
Cacna1c
Calcium channel, voltage-dependent, L type, alpha 1C subunit.
   
 0.945
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.