STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hadhbhydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta. (474 aa)    
Predicted Functional Partners:
Hadha
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha.
 0.999
Hadh
hydroxyacyl-CoA dehydrogenase.
 
 0.992
LOC102921651
enoyl-CoA delta isomerase 2, mitochondrial.
  
 0.992
ENSPEMP00000024414
annotation not available
  
 0.992
Ehhadh
enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase.
 
 0.991
Hmgcs2
3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2.
  
 0.990
Hmgcs1
3-hydroxy-3-methylglutaryl-CoA synthase 1.
  
 0.990
Eci1
enoyl-CoA delta isomerase 1.
  
 0.987
Cryl1
Crystallin lambda 1.
  
 0.982
Echdc1
ethylmalonyl-CoA decarboxylase 1.
  
 0.972
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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