STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PodnPodocan. (614 aa)    
Predicted Functional Partners:
Adgrl3
Adhesion G protein-coupled receptor L3.
    
  0.907
Adgrl1
Adhesion G protein-coupled receptor L1.
    
  0.907
Adgrl2
Adhesion G protein-coupled receptor L2.
    
  0.907
Ntng1
Netrin G1.
    
 0.814
Eef1g
Eukaryotic translation elongation factor 1 gamma.
    
  0.726
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
   
 0.709
Met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.709
Cask
Calcium/calmodulin dependent serine protein kinase.
    
  0.705
ENSPEMP00000036168
annotation not available
    
 0.686
Fras1
Fraser extracellular matrix complex subunit 1.
   
 0.657
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.