STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RngttRNA guanylyltransferase and 5'-phosphatase. (597 aa)    
Predicted Functional Partners:
Supt5
SPT5 homolog, DSIF elongation factor subunit.
    
 0.998
Rnmt
RNA (guanine-7-) methyltransferase.
   
 0.992
Polr2a
RNA polymerase II subunit A.
    
 0.986
Ncor1
Nuclear receptor co-repressor 1.
    
 0.935
Gps2
G protein pathway suppressor 2.
    
 0.935
Ncor2
Nuclear receptor co-repressor 2.
    
 0.935
ENSPEMP00000021503
annotation not available
    
 0.935
Polr2c
RNA polymerase II subunit C.
   
 0.933
Polr2g
RNA polymerase II subunit G.
    
 0.908
2300002M23Rik
Chromosome unknown open reading frame, human C6orf15.
    
 0.904
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.