STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddx24DEAD-box helicase 24. (862 aa)    
Predicted Functional Partners:
Wdr74
WD repeat domain 74.
   
 0.994
Rbm28
RNA binding motif protein 28.
   
 0.994
Ebna1bp2
EBNA1 binding protein 2.
   
 0.992
Wdr12
WD repeat domain 12.
   
 0.992
Ddx18
DEAD-box helicase 18.
  
 
0.991
Rbm34
RNA binding motif protein 34.
   
 0.989
Cebpz
CCAAT enhancer binding protein zeta.
   
 0.987
Pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.986
Noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
 0.983
Pum3
Pumilio homolog 3-like.
   
 0.983
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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