STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cd209cCD209c antigen. (166 aa)    
Predicted Functional Partners:
Lsp1
Lymphocyte specific protein 1.
    
 0.881
Plk3
Polo like kinase 3.
    
  0.844
Cd209a
CD209a antigen.
  
 
 
0.840
Arhgef12
Rho guanine nucleotide exchange factor (GEF) 12.
     
 0.837
Ksr1
Kinase suppressor of ras 1.
    
 0.832
Icam2
Intercellular adhesion molecule 2.
     
 0.775
Cd209b
CD209b antigen.
  
 
 
0.775
Rhoa
Ras homolog family member A.
    
  0.769
4930544G11Rik
RIKEN cDNA 4930544G11 gene.
    
  0.769
ENSPEMP00000029636
annotation not available
    
  0.769
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.