STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slco3a1Solute carrier organic anion transporter family member 3A1. (710 aa)    
Predicted Functional Partners:
Efcab9
EF-hand calcium binding domain 9.
    
 0.597
Catsper1
Cation channel, sperm associated 1.
    
 0.588
Catsperz
Cation channel sperm associated auxiliary subunit zeta.
    
  0.587
Catsper2
Cation channel sperm associated 2.
    
  0.587
Catsper3
Cation channel sperm associated 3.
    
  0.587
Tmem262
Transmembrane protein 262.
    
  0.587
Tmem249
Transmembrane protein 249.
    
  0.587
Slc9a3r1
SLC9A3 regulator 1.
    
 0.576
Slco5a1
Solute carrier organic anion transporter family member 5A1.
      
0.558
ENSPEMP00000006502
annotation not available
    
  0.539
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.