STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Car8Carbonic anhydrase 8. (290 aa)    
Predicted Functional Partners:
Rpf2
Ribosome production factor 2 homolog.
   
 
 0.827
Itpr1
Inositol 1,4,5-trisphosphate receptor 1.
   
 
 0.820
Rrs1
Ribosome biogenesis regulator 1 homolog.
   
 
 0.748
Wdr43
WD repeat domain 43.
   
    0.681
Grwd1
Glutamate-rich WD repeat containing 1.
   
  
 0.676
Noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
    0.650
Wdr36
WD repeat domain 36.
   
    0.650
Pwp2
PWP2 small subunit processome component.
   
    0.649
ENSPEMP00000000243
annotation not available
    
 
 0.643
Rpl5
Ribosomal protein L5.
    
 
 0.643
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.